functions related to noise assignment More...
Typedefs | |
| typedef std::map< int, unsigned int > | CounterClustMap |
| map for sorting clusters by population | |
Functions | |
| void | main (boost::program_options::variables_map args) |
| controlling function and user interface for noise assignment More... | |
Detailed Description
functions related to noise assignment
This module contains all function for identifying and dynamically reassigning noise. The underlaying principal is to assign low populated regions dynamically to the previous state, to improve the meta-stability of the resulting states. In Nagel19 it was shown that this works better than coring in case of low dimensional input. I.e., if the input is not homogeniously distributed in the input coordinates.
Function Documentation
◆ main()
| void Clustering::Noise::main | ( | boost::program_options::variables_map | args | ) |
controlling function and user interface for noise assignment
- Parameters
-
states single column file with state information. basename basename used in 'clustering network' (def.: 'clust.'). cmin population threshold in percent below which an geometrically isolated cluster gets assigned as noise. concat-nframes no. of frames per trajectory. concat-limits length of concated trajectories. output file name to store resulting trajectory. cores file name to store resulting cores.
- Returns
- void
- Note
- This code needs to be executed from the same directory as clustering density
- Warning
- This function is still in beta.